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Series GSE237036 Query DataSets for GSE237036
Status Public on Jul 20, 2023
Title Epigenome analysis of normal and breast cancer(BC) samples
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of peripheral blood mononuclear cells (PBMCs) in normal and BC samples. The Illumina Infinium 850k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 820,000 CpGs in PBMC samples. Samples included 50 newly diagnosed BC patients and 30 normal controls.
 
Overall design Bisulphite converted DNA from the 80 samples were hybridised to the Illumina Infinium 850k Human Methylation Beadchip.
 
Contributor(s) Wang T, Wang C
Citation(s) 37550304
Submission date Jul 11, 2023
Last update date Apr 03, 2024
Contact name Tiantian Wang
E-mail(s) 201920699@mail.sdu.edu.cn
Phone 17865125266
Organization name The Second Hospital of Shandong University
Street address Beiyuan
City Jinan
State/province 请选择
ZIP/Postal code 250033
Country China
 
Platforms (1)
GPL23976 Illumina Infinium HumanMethylation850 BeadChip
Samples (80)
GSM7593324 genomic DNA from BC2
GSM7593325 genomic DNA from BC3
GSM7593326 genomic DNA from BC4
Relations
BioProject PRJNA993607

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237036_RAW.tar 1.1 Gb (http)(custom) TAR (of IDAT)
GSE237036_matrix_processed.txt.gz 287.1 Mb (ftp)(http) TXT
Processed data are available on Series record

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