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| Status |
Public on Jul 06, 2023 |
| Title |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Jul 05, 2023 |
| Last update date |
Jul 06, 2023 |
| Contact name |
Rory James Maizels |
| E-mail(s) |
rory.maizels@crick.ac.uk
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| Organization name |
The Francis Crick Institute
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| Lab |
Briscoe Lab
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| Street address |
1 Midland Road
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| City |
London |
| ZIP/Postal code |
NW11AT |
| Country |
United Kingdom |
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| Platforms (3) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL25526 |
Illumina NovaSeq 6000 (Homo sapiens; Mus musculus) |
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| Samples (8)
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| GSM7528888 |
species mixture experiment with mouse and human to determine doublet rate |
| GSM7548931 |
background data with no 4sU, cells from D3 through to D8 |
| GSM7548957 |
replicate 1, sample collected days 3,4,5,6,7,8 |
| GSM7548958 |
replicate 2, sample collected days 3,4,5,6,7,8 |
| GSM7548959 |
replicate 3, sample collected days 3,4,5,6,7,8 |
| GSM7548960 |
replicate 4, sample collected days 3.2, 3.4, 3.6, 3.8 |
| GSM7549391 |
multiplexed different protocols |
| GSM7549392 |
piloting original scifate protocol with our cell system |
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| This SuperSeries is composed of the following SubSeries:
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| GSE236378 |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics [SPECIES_MIXTURE_DATA] |
| GSE236508 |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics [BACKGROUND_DATA] |
| GSE236512 |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics [EXPERIMENT_DATA] |
| GSE236517 |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics [PROTOCOL_PILOT_DATA] |
| GSE236518 |
Deep dynamical modelling of developmental trajectories with temporal transcriptomics [SCIFATE_PILOT_DATA] |
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| Relations |
| BioProject |
PRJNA991515 |
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