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Series GSE236478 Query DataSets for GSE236478
Status Public on Aug 16, 2023
Title Clariom D gene array of HBMEC cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Glioblastoma multiforme (GBM) presents a formidable clinical challenge due to its complex microenvironment. Here, we introduce lipid droplet (LD)-loaded macrophages, or tumor-associated foam cells (TAFs), as a previously unidentified immune cell population in GBM. Through extensive analyses of patient tumors, together with in vitro and in vivo investigations, we reveal that TAFs exhibit distinct pro-tumorigenic characteristics related to hypoxia, mesenchymal transition, angiogenesis, and impaired phagocytosis. Moreover, TAF presence correlates with worse patient outcome. Our mechanistic investigations demonstrate that TAF formation is facilitated by lipid cargo from extracellular vesicles released by GBM cells. Importantly, we demonstrate that targeting key enzymes involved in LD formation, such as DGAT1 or ACSL, effectively disrupts TAF functionality. This study establishes TAFs as a prominent immune cell entity in GBM and provides valuable insights into their interplay within the microenvironment. Disrupting LD formation to target TAFs presents an interesting avenue for future therapeutic development in GBM.
 
Overall design 8 samples from 2 Donors, out of which: 2 are HBMECs that received serum-free conditioned media, 2 are HBMECs that received serum-free conditioned media and LDDDs, 2 are HBMECs that received Evs, and 2 are HBMECs that received Evs and LDDDs.
 
Contributor(s) Governa V, de Oliveira KG, Offer S, Magaña MC, Rudenstam AB, Li J, Beyer S, Johansson MC, Månsson A, Edvardsson C, Durmo F, Boukredine A, Gezelius E, Menard JA, Garza R, Jakobsson J, de Neergaard T, Sundgren PC, Nordenfelt P, Darabi A, Forsberg-Nilsson K, Talbot H, Bengzon J, Belting M
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Submission date Jul 05, 2023
Last update date Aug 17, 2023
Contact name Mattias Belting
E-mail(s) mattias.belting@med.lu.se
Organization name Lund University
Department Clinical Sciences Lund
Lab Tumor Microenvironment
Street address Barngatan
City Lund
State/province Skåne
ZIP/Postal code SE-221 85
Country Sweden
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (8)
GSM7548623 HBMEC_CM_SF_D1
GSM7548624 HBMEC_CM_SF_D2
GSM7548625 HBMEC_CM_SF_LDDD_D1
Relations
BioProject PRJNA991457

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236478_RAW.tar 199.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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