|
| Status |
Public on Aug 30, 2023 |
| Title |
Atypical modes of CTCF binding facilitate tissue-specific and neuronal activity-dependent gene expression states. |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 27, 2023 |
| Last update date |
Aug 30, 2023 |
| Contact name |
Morgan Crewe |
| E-mail(s) |
Morgan.Crewe@UTSouthwestern.edu
|
| Phone |
4345941229
|
| Organization name |
University of Texas Southwestern Medical Center
|
| Department |
Psychiatry
|
| Lab |
Madabhushi
|
| Street address |
2201 Inwood Road
|
| City |
Dalals |
| State/province |
TX |
| ZIP/Postal code |
75235 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (16)
|
| GSM7512553 |
CN,CTCF_CON_Input_2 |
| GSM7512554 |
CN,CTCF_NMDA_ChIP_1 |
| GSM7512555 |
CN,CTCF_NMDA_ChIP_2 |
| GSM7512556 |
CN,CTCF_NMDA_Input_1 |
| GSM7512557 |
CN,CTCF_NMDA_Input_2 |
| GSM7512558 |
CN,SMC1_CON_ChIP_1 |
| GSM7512559 |
CN,SMC1_CON_ChIP_2 |
| GSM7512560 |
CN,SMC1_CON_Input_1 |
| GSM7512561 |
CN,SMC1_CON_Input_2 |
| GSM7512562 |
CN,SMC1_NMDA_ChIP_1 |
| GSM7512563 |
CN,SMC1_NMDA_ChIP_2 |
| GSM7512564 |
CN,SMC1_NMDA_Input_1 |
| GSM7512565 |
CN,SMC1_NMDA_Input_2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE235970 |
Atypical modes of CTCF binding facilitate tissue-specific and neuronal activity-dependent gene expression states [CTCF_ChIP-seq] |
| GSE235971 |
Atypical modes of CTCF binding facilitate tissue-specific and neuronal activity-dependent gene expression states [SMC1_ChIP-seq] |
|
| Relations |
| BioProject |
PRJNA988096 |
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