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Series GSE235058 Query DataSets for GSE235058
Status Public on Jun 16, 2024
Title Ferritinophagy is a Druggable Vulnerability of Quiescent Leukemic Stem Cells [scRNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Acute myeloid leukemia (AML) remains a challenging hematological malignancy with poor prognosis and limited treatment options. Post-therapy relapse, particularly driven by leukemic stem cells (LSCs), contributes to therapeutic failure and adverse outcome. Here, we investigated the role of quiescence and its associated molecular mechanisms in AML pathogenesis and identified potential vulnerabilities for therapeutic intervention. We found that quiescent AML cells, enriched for LSC functions, exhibited a distinct gene set that served as a significant prognostic factor for poor outcomes in AML patients. Furthermore, quiescent cells displayed heightened autophagic activity, with a reliance on ferritinophagy, a selective form of autophagy mediated by Nuclear Receptor Coactivator 4 (NCOA4), for iron bioavailability. Inhibition of NCOA4 genetically or chemically showed potent anti-leukemic effects, particularly targeting the LSC compartment. These findings uncover that ferritinophagy inhibition may represent a promising therapeutic strategy for patients with AML.
 
Overall design Two PDX AML samples (TUH84 and TUH102) were analyzed seven days after xenotransplantation in vivo in immunodeficient mice.
 
Contributor(s) Larrue C, Tamburini J
Citation(s) 39047119
Submission date Jun 15, 2023
Last update date Sep 16, 2024
Contact name Jerome Tamburini
E-mail(s) jerome.tamburinibonnefoy@unige.ch
Organization name Cochin Institute
Lab jerome tamburini
Street address 22 rue mechain
City paris
State/province N/A
ZIP/Postal code 75014
Country France
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (2)
GSM7494135 TUH84P2 day 7
GSM7494136 TUH102P2 day 7
This SubSeries is part of SuperSeries:
GSE235070 Ferritinophagy is a Druggable Vulnerability of Quiescent Leukemic Stem Cells
Relations
BioProject PRJNA984274

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235058_RAW.tar 38.1 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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