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Series GSE235032 Query DataSets for GSE235032
Status Public on Aug 01, 2023
Title Role of Znf750 in skin development
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The skin epidermis is a constantly renewing stratified epithelial tissue that provides essential protective barrier functions. The major barrier is at the outermost layers of the epidermis, formed by terminally differentiated keratinocytes reinforced by proteins and lipids of their cornified envelope (CE), and disruptions to this process characterizes common skin disorders. ZNF750 is an epithelial transcription factor essential for in vitro keratinocyte differentiation, whose autosomal dominant mutation in humans causes psoriasis-like skin disease. Here, we report epidermal-specific Znf750 conditional knockout mouse model utilized to uncover the role of Znf750 in epidermal development. We show that deletion of Znf750 in the developing skin does not block epidermal differentiation, suggesting in vivo compensatory feedback mechanisms, yet results in impaired barrier function and perinatal lethality. Molecular dissection uncovered ultrastructural defects in the differentiated layers of the epidermis, accompanied by alterations in the expression of ZNF750-dependent genes encoding for key proteins and lipids involved in CE formation, including gene subsets known to be mutated in skin disease with impaired barrier function.
 
Overall design Newborn mouse epidermal cells were purified fromZnf750 knock out and control mice, and RNA was analyzed by RNA-seq.
 
Contributor(s) Oss-Ronen L, Cohen I
Citation(s) 37660780
Submission date Jun 15, 2023
Last update date Oct 31, 2023
Contact name Idan Cohen
E-mail(s) idancoh29@gmail.com
Phone +972-58-4266754
Organization name Ben-Gurion University
Department Microbiology, Immunology and Genetics
Lab Idan Cohen
Street address David Ben Gurion Blvd 1
City Beer Sheva
ZIP/Postal code 84105
Country Israel
 
Platforms (1)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (6)
GSM7493475 Epidermis_Control_1
GSM7493476 Epidermis_Control_2
GSM7493477 Epidermis_Control_3
Relations
BioProject PRJNA984219

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Supplementary file Size Download File type/resource
GSE235032_RAW.tar 1.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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