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| Status |
Public on May 23, 2023 |
| Title |
Cell type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells |
| Organisms |
Pan troglodytes; Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37292820, 38358392 |
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| Submission date |
May 19, 2023 |
| Last update date |
Mar 20, 2024 |
| Contact name |
Hunter Fraser |
| Organization name |
Stanford University
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| Street address |
327 Campus Drive
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| City |
Stanford |
| ZIP/Postal code |
94305 |
| Country |
USA |
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| Platforms (1) |
| GPL27803 |
Illumina HiSeq 4000 (Homo sapiens; Pan troglodytes) |
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| Samples (33)
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| GSM7398425 |
Hybrid Hepatocyte progenitor, Hybrid2 |
| GSM7398426 |
Hybrid Pancreatic progenitor, Hybrid1 |
| GSM7398427 |
Hybrid Pancreatic progenitor, Hybrid2 |
| GSM7398428 |
Hybrid Motor neuron, Hybrid1 |
| GSM7398429 |
Hybrid Motor neuron, Hybrid2 |
| GSM7398430 |
Hybrid Cardiomyocte, Hybrid1, rep1 |
| GSM7398431 |
Hybrid Cardiomyocte, Hybrid2, rep1 |
| GSM7398432 |
Hybrid Skeletal myocyte, Hybrid1, rep1 |
| GSM7398433 |
Hybrid Skeletal myocyte, Hybrid2, rep1 |
| GSM7398434 |
Hybrid Hepatocyte progenitor, Hybrid1, rep1 |
| GSM7398435 |
Hybrid Hepatocyte progenitor, Hybrid2, rep1 |
| GSM7398436 |
Hybrid Pancreatic progenitor, Hybrid1, rep1 |
| GSM7398437 |
Hybrid Pancreatic progenitor, Hybrid2, rep1 |
| GSM7398438 |
Hybrid Cardiomyocte, Hybrid1, rep2 |
| GSM7398439 |
Hybrid Motor neuron, Hybrid2, rep1 |
| GSM7398440 |
Hybrid Cardiomyocte, Hybrid2, rep2 |
| GSM7398441 |
Hybrid Skeletal myocyte, Hybrid1, rep2 |
| GSM7398442 |
Hybrid Skeletal myocyte, Hybrid2, rep2 |
| GSM7398443 |
Hybrid Hepatocyte progenitor, Hybrid1, rep2 |
| GSM7398444 |
Hybrid Hepatocyte progenitor, Hybrid2, rep2 |
| GSM7398445 |
Hybrid Pancreatic progenitor, Hybrid1, rep2 |
| GSM7398446 |
Hybrid Pancreatic progenitor, Hybrid2, rep2 |
| GSM7398447 |
Hybrid Retinal pigment epithelium, Hybrid1, rep1 |
| GSM7398448 |
Hybrid Retinal pigment epithelium, Hybrid1, rep2 |
| GSM7398449 |
Hybrid Retinal pigment epithelium, Hybrid2, rep1 |
| GSM7398450 |
Hybrid Retinal pigment epithelium, Hybrid2, rep2 |
| GSM7398451 |
Hybrid Skeletal myocyte, Hybrid2, rep3 |
| GSM7398452 |
Hybrid Motor neuron, Hybrid1, rep1 |
| GSM7398453 |
Hybrid Motor neuron, Hybrid2, rep2 |
| GSM7398454 |
Hybrid Motor neuron, Hybrid1, rep2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE232947 |
Cell type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells [ATAC-seq] |
| GSE232948 |
Cell type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells [RNA-seq] |
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| Relations |
| BioProject |
PRJNA974465 |
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