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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 21, 2024 |
| Title |
IL-1R signaling drives enteric glia-macrophage interaction in colorectal cancer progression [scRNA-Seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To characterize the immune landscape of colorectal tumors, we analysed the immune tumor microenvironment cells from mice bearing orthotopic tumors using single cell transcriptomics.
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| Overall design |
scRNA-seq data from BL6 mice bearing orthotopic colon tumors, 21 days after tumor induction (n = 3).
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| Contributor(s) |
van Baarle L, De Simone V, Schneider L, Santhosh S, Abdurahiman S, Biscu F, Schneider R, Zanoletti L, Verbandt S, Hu Z, Stakenborg M, Ke B, García-Reyes B, Henn J, Toma M, Vanmechelen M, De Smet F, Ibiza S, Tejpar S, Wehner S, Matteoli G |
| Citation(s) |
39030280 |
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| Submission date |
May 05, 2023 |
| Last update date |
Aug 15, 2024 |
| Contact name |
Gianluca Matteoli |
| Organization name |
KU Leuven
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| Street address |
Herestraat 49
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| City |
Leuven |
| ZIP/Postal code |
3000 |
| Country |
Belgium |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE231804 |
IL-1R signaling drives enteric glia-macrophage interactions in colorectal cancer |
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| Relations |
| BioProject |
PRJNA967710 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE231803_GEO_Orthotopic_CRC_model_Immune_Cells_Seurat_Object.rds.gz |
69.4 Mb |
(ftp)(http) |
RDS |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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