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| Status |
Public on May 16, 2024 |
| Title |
Investigation of the regulon and RNA targets of RNase Y in Campylobacter jejuni |
| Organism |
Campylobacter jejuni |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq was used to study gene expression profiles and potential processing sites in Campylobacter jejuni NCTC11168 wildtype and RNase Y (rny, Cj1209) deletion.
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| Overall design |
Total RNA was extracted from C. jejuni NCTC11168 WT and RNase Y deletion strains grown to exponential phase, genomic DNA was removed with DNase I and rRNA depleted, cDNA libraries were prepared at Vertis Biotechnologie AG, Freising, Germany, deep-sequencing was performed on an Illumina NextSeq 500 instrument
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| Contributor(s) |
König F, Svensson SL, Sharma CM |
| Citation(s) |
38897989 |
| |
| Submission date |
Apr 28, 2023 |
| Last update date |
Jun 20, 2024 |
| Contact name |
Cynthia Sharma |
| Organization name |
University of Würzburg
|
| Street address |
Josef-Schneider-Straße 2
|
| City |
Würzburg |
| State/province |
Bavaria |
| ZIP/Postal code |
97080 |
| Country |
Germany |
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| Platforms (1) |
| GPL26884 |
Illumina NextSeq 500 (Campylobacter jejuni) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA962809 |
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