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Series GSE230656 Query DataSets for GSE230656
Status Public on Dec 15, 2023
Title RNA sequencing of lungs from WT and GSDMD knockout mouse lungs after influenza virus H1N1 strain PR8 infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary WT and GSDMD KO mice were infected with 50 TCID50 influenza virus strain PR8. 7 days post infection, RNA was extracted from lung tissue using TRIzol. RNA library preparation and sequencing was performed by Genewiz.
 
Overall design Lung mRNA analysis at 7 days post infection of WT and GSDMD KO mice with influenza virus H1N1 strain PR8.
Web link https://pubmed.ncbi.nlm.nih.gov/38553499/
 
Contributor(s) Yount J
Citation(s) 38553499
Submission date Apr 26, 2023
Last update date Mar 31, 2024
Contact name Jacob Yount
E-mail(s) Jacob.yount@osumc.edu
Organization name The Ohio State University
Department Microbial Infection and Immunity
Street address 460 W 12th Ave, BRT 790
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM7230737 WT lung rep1
GSM7230738 WT lung rep2
GSM7230739 WT lung rep3
Relations
BioProject PRJNA962072

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230656_normalizedCountsWithAnnotations.txt.gz 2.0 Mb (ftp)(http) TXT
GSE230656_rawCounts.txt.gz 455.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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