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| Status |
Public on Aug 21, 2024 |
| Title |
Members of an array of zinc finger proteins specify distinct Hox chromatin boundaries [ChIP-Seq2] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
In this experiment, we sought to identify how the distribution of CTCF, MAZ, and RAD21 change in CTCF-degron (no auxin), CTCF-degron (auxin), CTCF-degron MAZ KO (no auxin), and CTCF-degron MAZ KO (auxin) backgrounds in mouse embryonic stem cells (ESCs).
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| Overall design |
Examination of CTCF, MAZ, and RAD21 binding in embryonic stem cells using ChIP-seq, by status of CTCF-degron (no auxin), CTCF-degron (auxin), CTCF-degron MAZ KO (no auxin), and CTCF-degron MAZ KO (auxin).
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| |
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| Contributor(s) |
Reinberg D |
| Citation(s) |
39173638 |
| |
| Submission date |
Apr 24, 2023 |
| Last update date |
Aug 30, 2024 |
| Contact name |
Danny Reinberg |
| Organization name |
University of Miami
|
| Department |
Sylvester Cancer Center/Human Genetics
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| Lab |
Reinberg Lab
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| Street address |
1501 NW 10th Ave
|
| City |
Miami |
| State/province |
Florida |
| ZIP/Postal code |
33136 |
| Country |
USA |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (20)
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| This SubSeries is part of SuperSeries: |
| GSE230482 |
Members of an array of zinc finger proteins specify distinct Hox chromatin boundaries |
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| Relations |
| BioProject |
PRJNA961191 |
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