NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE230190 Query DataSets for GSE230190
Status Public on Jul 24, 2024
Title Immune training in aged microglia [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Aged mice were treated intravenously (i.v) with BCG or saline to study an effect in microglia for key histone modififications H3K4me3, H3K27ac involved in trained immune response.
 
Overall design Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for the histone modifications H3K4me3 and H3K27ac in Cd11b+ cells, isolated from mice treated with BCG or Control (Saline)
 
Contributor(s) Tiwari V, Prajapati B, Simons M
Citation(s) 39053462
Submission date Apr 20, 2023
Last update date Oct 23, 2024
Contact name Vini Tiwari
E-mail(s) v.tiwari@tum.de
Organization name Technical University Munich, (TUM), Deutsches Zentrum für Neurodegenerative Erkrankungen
Street address Feodor Lynen Straße 17
City Munich
ZIP/Postal code 81377
Country Germany
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7191449 Microglia_H3K4me3_BCG_rep1
GSM7191450 Microglia_H3K4me3_BCG_rep2
GSM7191451 Microglia_H3K4me3_Control_rep1
Relations
BioProject PRJNA957806

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230190_RAW.tar 1.1 Gb (http)(custom) TAR (of BED, BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap