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Series GSE228764 Query DataSets for GSE228764
Status Public on Sep 26, 2023
Title Cellulose biosynthesis inhibitor isoxaben causes nutrient-dependent and tissue-specific Arabidopsis phenotypes
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary n/a - Letter to the Editor
 
Overall design RNA-seq data from Arabidopsis thaliana Col-0 roots harvested 6 days after stratification
Web link https://doi.org/10.1093/plphys/kiad538
 
Contributor(s) Ogden M, Whitcomb SJ, Khan G, Roessner U, Hoefgen R, Persson S
Citation(s) 37823413
Submission date Apr 02, 2023
Last update date Oct 30, 2023
Contact name Sarah J Whitcomb
Organization name USDA-ARS
Department Cereal Crops Research Unit
Street address 502 Walnut St
City Madison
State/province WI
ZIP/Postal code 53726
Country USA
 
Platforms (1)
GPL28290 DNBSEQ-G400 (Arabidopsis thaliana)
Samples (24)
GSM7136081 S01_6mM.KNO3_rep1
GSM7136082 S02_6mM.KNO3_rep2
GSM7136083 S03_6mM.KNO3_rep3
Relations
BioProject PRJNA951436

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228764_cts_str2_STARout_allsamples.txt.gz 1013.8 Kb (ftp)(http) TXT
GSE228764_nCts_DESeq2_allsamples.txt.gz 4.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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