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Series GSE228675 Query DataSets for GSE228675
Status Public on Mar 30, 2024
Title Transcriptional analysis of T cells derived from individuals with neurodevelopmental disorder carrying de novo heterozygous PSMC3 variants.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Gene expression profiling on T cells to investigate the effects of PSMC3 loss-of-function variants on the immune system using the Nanostring nCounter® Human AutoImmune Profiling Panel.
 
Overall design Peripheral blood mononuclear cells (PBMC) isolated from blood draws from patients and their parents (father and/or mother) were subjected to polyclonal stimulation with phytohemagglutinin (PHA) and interleukin-2 (IL-2) to expand naive T cells. After 3 weeks of culture, total RNA was isolated from resting T cells for gene expression analysis.
 
Contributor(s) Ebstein F, Studencka-Turski M
Citation(s) 37256937
Submission date Mar 31, 2023
Last update date Jul 01, 2024
Contact name Frédéric Ebstein
E-mail(s) frederic.ebstein@gmail.com
Organization name French Institute of Health and Medical Research (Inserm)
Department L'unité de recherche de l'institut du thorax, Inserm UMR 1087
Street address IRS-UN - 8 quai Moncousu - BP 70721
City Nantes
ZIP/Postal code 44007
Country France
 
Platforms (1)
GPL33300 nCounter Human AutoImmune Profiling Panel
Samples (9)
GSM7134838 PATIENT_#13
GSM7134839 PATIENT_#13'S_FATHER
GSM7134840 PATIENT_#17
Relations
BioProject PRJNA950994

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228675_RAW.tar 90.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table

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