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| Status |
Public on Feb 09, 2024 |
| Title |
Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
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| Summary |
Spatial transcriptome analysis of brain sections from non-stressed controls (CON), susceptible mice (SUS) and resistant mice (RES) was performed to investigate spatial patterns of gene expression in multiple brain regions to gain new insights into stress susceptibility.
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| Overall design |
Animals were subjected to 10 days of chronic social defeat stress and then phenotypes were acquired using social interaction tests.Fresh brain tissue was collected 1.5 hours after the last CSDS exposure of mice, and we obtained three coronal sections(Bregma2.0~2.1) from the left brain of Control, susceptible, resilient mouse by cryosections of mouse brains. After that Spatial transcriptome (ST) sequencing was performed.
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| Contributor(s) |
Wang T, Song Z, Wu H |
| Citation(s) |
38264685 |
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| Submission date |
Mar 28, 2023 |
| Last update date |
Feb 10, 2024 |
| Contact name |
TING WANG |
| Organization name |
Beijing Institute of Basic Medical Sciences
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| Street address |
Haidian District, Beijing
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| City |
Beijing |
| ZIP/Postal code |
100850 |
| Country |
China |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA949622 |
