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| Status |
Public on Apr 01, 2023 |
| Title |
Identification of a DAMP receptor and its cognate peptide ligand in sweet potato (Ipomoea batatas) |
| Organism |
Ipomoea batatas |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We identified a leucine-rich repeat receptor kinase (IbLRR-RK1) that is induced upon wounding and herbivory, and related to peptide-elicitor receptors (PEPRs) from tomato and Arabidopsis. We also identified a gene encoding a precursor protein comprising a peptide ligand (IbPep1) for IbLRR-RK1.
RNAseq of I. batatas reveals differentially expressed genes (DEGs) upon IbPep1 and IbHypSysIV treatment
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| |
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for I. batatas leaves treated with water, IbHypSysIV or IbPep1
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| |
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| Contributor(s) |
Lu H, Meents AK, Fliegmann J, Hwang M, Suen C, Felix G, Mithöfer A, Yeh K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Mar 15, 2023 |
| Last update date |
Apr 01, 2023 |
| Contact name |
Axel Mithöfer |
| E-mail(s) |
amithoefer@ice.mpg.de
|
| Organization name |
Max-Planck-Institute for Chemical Ecology
|
| Department |
Plant Defense Physiology
|
| Street address |
Hans-Knöll-Straße 8
|
| City |
Jena |
| State/province |
Thuringia |
| ZIP/Postal code |
07745 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL30016 |
Illumina NovaSeq 6000 (Ipomoea batatas) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA944992 |
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