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Series GSE227213 Query DataSets for GSE227213
Status Public on Sep 27, 2023
Title Enhancing Autophagy in CD11c+ Antigen Presenting Cells as a Therapeutic Strategy for Acute Respiratory Distress Syndrome and Lung Inflammation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of autophagy in CD11c+ APCs in a mouse model of Poly(I:C)-induced ALI/ARDS
 
Overall design We generated two animal models; mice with a deletion of autophagy-related gene 5 (Atg5) specifically in CD11c+ APCs to impair autophagy and mice with overexpression of transcription factor EB (Tfeb), a regulator of autophagy, in CD11c+ APCs to constitutively induce autophagy.
 
Contributor(s) Quach C, Helou DG, Li M, Hurrell BP, Howard E, Shafiei-Jahani P, Soroosh P, Ou JJ, Razani B, Rehan V, Akbari O
Citation(s) 37590140
Submission date Mar 13, 2023
Last update date Sep 27, 2023
Contact name Christine Quach
E-mail(s) quachc@usc.edu
Organization name University of Southern California
Street address 1450 Biggy St NRT 5509
City Los Angeles
State/province CA
ZIP/Postal code 90033
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM7093267 Atg5 WT 1
GSM7093268 Atg5 WT 2
GSM7093269 Atg5 WT 3
Relations
BioProject PRJNA944147

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227213_Quach_ATG5_GeneCounts.txt.gz 671.3 Kb (ftp)(http) TXT
GSE227213_Quach_TFEB_GeneCounts.txt.gz 690.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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