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Series GSE227177 Query DataSets for GSE227177
Status Public on Dec 16, 2023
Title RNA-Seq analysis Ezh2 knockdown effect on vascular smooth muscle cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Vascular smooth muscle cells (VSMCs) phenotype switch has been thought to be critical to the development of thoracic aneurysm/dissection. To investigate the function EZH2 in the regulation of VSMCs phenotype switch, we established mouse vascular smooth muscle cells in which each target gene has been knocked down by siRNA.
 
Overall design VSMCs isolated and cultured from mouse aorta were siEzh2 or control (n=3 for each group) for 48 hours. Total RNA was isolated using Trizol reagent (Invitrogen, USA). Agilent 2100 Bioanalyzer (Agilent Technologies, USA) was used to evaluate the RNA quality.
 
Contributor(s) Yu W, Leng S, Xue S
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Submission date Mar 12, 2023
Last update date Dec 18, 2023
Contact name Shuai Leng
E-mail(s) lengshuai@tmu.edu.cn
Organization name Central Hospital Affiliated to Shandong First Medical University
Street address 105 Jiefang Road
City Jinan, Shandong
ZIP/Postal code 250000
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM7092765 Control_1 (Ezh2 KD control)
GSM7092766 Control_2 (Ezh2 KD control)
GSM7092767 Control_3 (Ezh2 KD control)
Relations
BioProject PRJNA943510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227177_RAW.tar 2.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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