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Series GSE22558 Query DataSets for GSE22558
Status Public on Jun 24, 2010
Title Effects of a high-fat maternal diet and embryonic Cited2 genotype on gene expression and development in mouse
Organism Mus musculus
Experiment type Expression profiling by array
Summary Deficiency of the transcription factor Cited2 in mice results in cardiac malformation, adrenal agenesis, neural tube, placental defects, and partially penetrant left-right patterning defects resulting from an abnormal Nodal->Pitx2c pathway. Here we show that a maternal high-fat diet more than doubles the penetrance of laterality defects and, surprisingly, induces palatal clefting in Cited2 deficient embryos. Both maternal diet and Cited2 deletion reduce embryo weight and kidney and thymus volume.
Expression profiling identified 40 embryonic transcripts including Pitx2 that were significantly affected by embryonic genotype-maternal diet interaction. We show that a high-fat diet reduces Pitx2c levels >2 fold in Cited2 deficient embryos and that Pitx2c deficiency results in cleft palate. Taken together, these results define a novel interaction between maternal high-fat diet and embryonic Cited2 deficiency that affects Pitx2c expression and results in abnormal laterality and cleft palate.
 
Overall design Two-factor design: diet (high fat or control) and genotype (Cited2 knockout or wildtype) with n=3 for each of the 4 factor combinations
 
Contributor(s) Bentham J, Michell A, Lockstone HE, Taylor JM, Andrew D, Schneider J, Brown NA, Bhattacharya S
Citation(s) 20566713
Submission date Jun 24, 2010
Last update date Jan 16, 2019
Contact name Shoumo Bhattacharya
E-mail(s) shoumo.bhattacharya@well.ox.ac.uk
Organization name Wellcome Centre For Human Genetics, University of Oxford
Department RDM Cardiovascular Medicine
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (12)
GSM559816 1218-4C
GSM559817 1307-8HF
GSM559818 1312-6HF
Relations
BioProject PRJNA128451

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22558_RAW.tar 22.3 Mb (http)(custom) TAR (of TXT)
GSE22558_non-normalized.txt.gz 2.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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