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| Status |
Public on Oct 26, 2023 |
| Title |
Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification [RNA-seq] |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To investigate the chromatin state into an adult stem cell lineage, we generate cell-type specific chromatin state maps in the adult Drosophila intestine and identify principal chromatin state transitions during lineage determination.
we profiled the binding sites of five chromatin-associated proteins from which the previously described five major types of chromatin.
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| Overall design |
Comparative chromatin accessibility (ATAC-seq) as well as gene expression (RNA-seq) in Drosophila ISC/EB in control and H1 RNAi conditions
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| |
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| Contributor(s) |
Josserand M, Rubanova N, Gervais L, Bardin AJ |
| Citation(s) |
38056452 |
| |
| Submission date |
Feb 09, 2023 |
| Last update date |
Jan 25, 2024 |
| Contact name |
Allison Bardin |
| E-mail(s) |
allison.bardin@curie.fr
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| Organization name |
Institut Curie
|
| Street address |
26 rue d'Ulm
|
| City |
Paris |
| ZIP/Postal code |
75005 |
| Country |
France |
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| Platforms (1) |
| GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE224967 |
Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification |
|
| Relations |
| BioProject |
PRJNA933189 |
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