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Series GSE223580 Query DataSets for GSE223580
Status Public on Jul 26, 2023
Title Hippocampus-specific transcriptome profiling after severe cerebral hypoperfusion in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Little is understood about the underlying cellular and molecular mechanisms related to hippocampus damage and glial activation after severe cerebral hypoperfusion.Efforts to explore the relationship between neuropathological and gene expression changes support a role for identifying novel molecular pathways by transcriptomic mechanisms.
To investigate hippocampus-specific transcriptome profiling after severe cerebral hypoperfusion in mice
 
Overall design Hippocampus-specific gene expression profiling analysis was performed using data obtained from RNA-seq of 3 biological replicates in sham and BCAS mice after hypoperfusion
Web link https://pubmed.ncbi.nlm.nih.gov/37266840/
 
Contributor(s) Hou S, Zhang Z
Citation(s) 37266840
Submission date Jan 24, 2023
Last update date Jul 27, 2023
Contact name Zengyu Zhang
E-mail(s) 23111360003@m.fudan.edu.cn
Phone 18800338608
Organization name Fudan University
Department Neurology
Street address Dong'an Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM6964918 RNA_seq_Sham_hippocampus_1
GSM6964919 RNA_seq_Sham_hippocampus_2
GSM6964920 RNA_seq_Sham_hippocampus_3
Relations
BioProject PRJNA926913

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223580_RAW.tar 22.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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