|
| Status |
Public on Aug 01, 2023 |
| Title |
Transcriptome changes following acute serine starvation in breast cancer cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We cultured the ER negative breast cancer cell line MDA-MB-231 and the ER positive breast cancer cell line MCF7 in serine-free media for 24h. RNA was extracted from the cells and submitted for RNA sequencing.
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| |
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| Overall design |
Proper number of cells were plated in 100mm dishes before treatment in +Ser or -Ser media for 24h. Each group contains 3 biological replicates.
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| Contributor(s) |
Li AM, Ye J |
| Citation(s) |
37695911 |
| |
| Submission date |
Jan 06, 2023 |
| Last update date |
Nov 16, 2023 |
| Contact name |
Jiangbin ye |
| E-mail(s) |
yej1@stanford.edu
|
| Phone |
650-724-7459
|
| Organization name |
Stanford university
|
| Street address |
269 Campus Drive CCSR-South 1245
|
| City |
palo alto |
| State/province |
California |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE222343 |
Transcriptomic and epigenomic changes following acute serine starvation in breast cancer cells |
|
| Relations |
| BioProject |
PRJNA919009 |
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