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| Status |
Public on Dec 01, 2023 |
| Title |
Heterogeneous ribonucleoprotein interactions and impeded translational elongation in the respiratory tissue of SARS-CoV-2 pathology |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| |
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| Overall design |
Refer to individual Series
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| Citation(s) |
37907741 |
| |
| Submission date |
Jan 05, 2023 |
| Last update date |
Jan 16, 2024 |
| Contact name |
Hyeshik Chang |
| E-mail(s) |
hyeshik@snu.ac.kr
|
| Organization name |
Seoul National University
|
| Department |
School of Biological Sciences
|
| Lab |
Hyeshik Chang Lab
|
| Street address |
Building 203 Room 525, School of Biological Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu
|
| City |
Seoul |
| State/province |
South Korea |
| ZIP/Postal code |
08826 |
| Country |
South Korea |
| |
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| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (72)
|
| GSM6918924 |
NextSeq Ribo-seq, Early set, control, rep 1 |
| GSM6918925 |
NextSeq Ribo-seq, Early set, control, rep 2 |
| GSM6918926 |
NextSeq Ribo-seq, Early set, control, rep 3 |
| GSM6918927 |
NextSeq Ribo-seq, Early set, control, rep 4 |
| GSM6918928 |
NextSeq Ribo-seq, Early set, 1 dpi, rep 1 |
| GSM6918929 |
NextSeq Ribo-seq, Early set, 1 dpi, rep 2 |
| GSM6918930 |
NextSeq Ribo-seq, Early set, 1 dpi, rep 3 |
| GSM6918931 |
NextSeq Ribo-seq, Early set, 1 dpi, rep 4 |
| GSM6918932 |
NextSeq Ribo-seq, Early set, 2 dpi, rep 1 |
| GSM6918933 |
NextSeq Ribo-seq, Early set, 2 dpi, rep 2 |
| GSM6918934 |
NextSeq Ribo-seq, Early set, 2 dpi, rep 3 |
| GSM6918935 |
NextSeq Ribo-seq, Early set, 2 dpi, rep 4 |
| GSM6918936 |
NextSeq Ribo-seq, Late set, control, rep 1 |
| GSM6918937 |
NextSeq Ribo-seq, Late set, control, rep 2 |
| GSM6918938 |
NextSeq Ribo-seq, Late set, control, rep 3 |
| GSM6918939 |
NextSeq Ribo-seq, Late set, control, rep 4 |
| GSM6918940 |
NextSeq Ribo-seq, Late set, 5 dpi, rep 1 |
| GSM6918941 |
NextSeq Ribo-seq, Late set, 5 dpi, rep 2 |
| GSM6918942 |
NextSeq Ribo-seq, Late set, 5 dpi, rep 3 |
| GSM6918943 |
NextSeq Ribo-seq, Late set, 5 dpi, rep 4 |
| GSM6918944 |
NextSeq Ribo-seq, Late set, 7 dpi, rep 1 |
| GSM6918945 |
NextSeq Ribo-seq, Late set, 7 dpi, rep 2 |
| GSM6918946 |
NextSeq Ribo-seq, Late set, 7 dpi, rep 3 |
| GSM6918947 |
NextSeq Ribo-seq, Late set, 7 dpi, rep 4 |
| GSM6918948 |
NovaSeq Ribo-seq, Early set, control, rep 1 |
| GSM6918949 |
NovaSeq Ribo-seq, Early set, control, rep 2 |
| GSM6918950 |
NovaSeq Ribo-seq, Early set, control, rep 3 |
| GSM6918951 |
NovaSeq Ribo-seq, Early set, control, rep 4 |
| GSM6918952 |
NovaSeq Ribo-seq, Early set, 1 dpi, rep 1 |
| GSM6918953 |
NovaSeq Ribo-seq, Early set, 1 dpi, rep 2 |
| GSM6918954 |
NovaSeq Ribo-seq, Early set, 1 dpi, rep 3 |
| GSM6918955 |
NovaSeq Ribo-seq, Early set, 1 dpi, rep 4 |
| GSM6918956 |
NovaSeq Ribo-seq, Early set, 2 dpi, rep 1 |
| GSM6918957 |
NovaSeq Ribo-seq, Early set, 2 dpi, rep 2 |
| GSM6918958 |
NovaSeq Ribo-seq, Early set, 2 dpi, rep 3 |
| GSM6918959 |
NovaSeq Ribo-seq, Early set, 2 dpi, rep 4 |
| GSM6918960 |
NovaSeq Ribo-seq, Late set, control, rep 1 |
| GSM6918961 |
NovaSeq Ribo-seq, Late set, control, rep 2 |
| GSM6918962 |
NovaSeq Ribo-seq, Late set, control, rep 3 |
| GSM6918963 |
NovaSeq Ribo-seq, Late set, control, rep 4 |
| GSM6918964 |
NovaSeq Ribo-seq, Late set, 5 dpi, rep 1 |
| GSM6918965 |
NovaSeq Ribo-seq, Late set, 5 dpi, rep 2 |
| GSM6918966 |
NovaSeq Ribo-seq, Late set, 5 dpi, rep 3 |
| GSM6918967 |
NovaSeq Ribo-seq, Late set, 5 dpi, rep 4 |
| GSM6918968 |
NovaSeq Ribo-seq, Late set, 7 dpi, rep 1 |
| GSM6918969 |
NovaSeq Ribo-seq, Late set, 7 dpi, rep 2 |
| GSM6918970 |
NovaSeq Ribo-seq, Late set, 7 dpi, rep 3 |
| GSM6918971 |
NovaSeq Ribo-seq, Late set, 7 dpi, rep 4 |
| GSM6918976 |
RNA-seq, Early set, control, rep 1 |
| GSM6918977 |
RNA-seq, Early set, control, rep 2 |
| GSM6918978 |
RNA-seq, Early set, control, rep 3 |
| GSM6918979 |
RNA-seq, Early set, control, rep 4 |
| GSM6918980 |
RNA-seq, Early set, 1 dpi, rep 1 |
| GSM6918981 |
RNA-seq, Early set, 1 dpi, rep 2 |
| GSM6918982 |
RNA-seq, Early set, 1 dpi, rep 3 |
| GSM6918983 |
RNA-seq, Early set, 1 dpi, rep 4 |
| GSM6918984 |
RNA-seq, Early set, 2 dpi, rep 1 |
| GSM6918985 |
RNA-seq, Early set, 2 dpi, rep 2 |
| GSM6918986 |
RNA-seq, Early set, 2 dpi, rep 3 |
| GSM6918987 |
RNA-seq, Early set, 2 dpi, rep 4 |
| GSM6918988 |
RNA-seq, Late set, control, rep 1 |
| GSM6918989 |
RNA-seq, Late set, control, rep 2 |
| GSM6918990 |
RNA-seq, Late set, control, rep 3 |
| GSM6918991 |
RNA-seq, Late set, control, rep 4 |
| GSM6918992 |
RNA-seq, Late set, 5 dpi, rep 1 |
| GSM6918993 |
RNA-seq, Late set, 5 dpi, rep 2 |
| GSM6918994 |
RNA-seq, Late set, 5 dpi, rep 3 |
| GSM6918995 |
RNA-seq, Late set, 5 dpi, rep 4 |
| GSM6918996 |
RNA-seq, Late set, 7 dpi, rep 1 |
| GSM6918997 |
RNA-seq, Late set, 7 dpi, rep 2 |
| GSM6918998 |
RNA-seq, Late set, 7 dpi, rep 3 |
| GSM6918999 |
RNA-seq, Late set, 7 dpi, rep 4 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE222249 |
Heterogeneous ribonucleoprotein interactions and impeded translational elongation in the respiratory tissue of SARS-CoV-2 pathology (Ribo-Seq) |
| GSE222251 |
Heterogeneous ribonucleoprotein interactions and impeded translational elongation in the respiratory tissue of SARS-CoV-2 pathology (RNA-Seq) |
|
| Relations |
| BioProject |
PRJNA918676 |
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