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Series GSE22219 Query DataSets for GSE22219
Status Public on Jul 08, 2011
Title Gene expression profiling of early primary breast cancer to identify prognostic markers and associated pathways
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Retrospective series of primary breast cancer patients who received surgery between 1989 and 1992. Patients received adjuvant chemotherapy and/or adjuvant hormone therapy, or no adjuvant treatment. Tamoxifen was used as endocrine therapy for 5 years in ER+ BC patients. Patients who were <50 years of age, with lymph node positive tumors, or ER– and/or >3 cm in diameter, received adjuvant cyclophosphamide, methotrexate, and 5-fluorouracil (CMF) for six cycles, in a thrice weekly intravenous regimen. Patients >50 years of age with ER–, lymph node–positive tumors also received CMF.
 
Overall design Retrospective clinical study to identify breast cancer prognostic markers and associated pathways. 216 early primary breast cancers were considered who had complete 10-years follow-up, clinical and demographics information.
mRNA profiling data.
 
Contributor(s) Buffa FM, Winchester L
Citation(s) 21737487
Submission date Jun 08, 2010
Last update date Jan 29, 2013
Contact name Francesca Buffa
E-mail(s) francesca.buffa@imm.ox.ac.uk
Organization name University of Oxford
Street address The Weatherall Institute of Molecular Medicine
City Oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
 
Platforms (1)
GPL6098 Illumina humanRef-8 v1.0 expression beadchip
Samples (216)
GSM553184 BCmRNA 1
GSM553185 BCmRNA 2
GSM553186 BCmRNA 3
This SubSeries is part of SuperSeries:
GSE22220 Analysis of early primary breast cancer to identify prognostic markers and associated pathways: mRNA and miRNA profiling
Relations
BioProject PRJNA129185

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22219_RAW.tar 2.5 Mb (http)(custom) TAR
GSE22219_non-normalized_data_mRNA.txt.gz 18.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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