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Series GSE220988 Query DataSets for GSE220988
Status Public on Feb 08, 2023
Title Excitotoxic glutamate levels drive spinal cord ependymal stem cell proliferation and fate specification through CP-AMPAR signaling
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary The adult spinal cord contains a population of ependymal-derived neural stem/progenitor cells (epNSPCs) that are normally quiescent, but are activated to proliferate, differentiate, and migrate after spinal cord injury. The mechanisms that regulate their response to injury cues, however, remain unknown. Here, we demonstrate that excitotoxic levels of glutamate promote the proliferation and astrocytic fate specification of adult spinal cord epNSPCs through CP-AMPAR signaling.
 
Overall design Bulk RNA-sequencing on rat epNSPCs in the presence and absence of excitotoxic levels of glutamate in vitro.
Web link https://pubmed.ncbi.nlm.nih.gov/36764296/
 
Contributor(s) Hachem LD, Hong J, Velumian A, Mothe AJ, Tator CH, Fehlings MG
Citation(s) 36764296
Submission date Dec 14, 2022
Last update date May 10, 2023
Contact name Michael Fehlings
E-mail(s) michael.fehlings@uhn.ca
Organization name University Health Network
Department Genetics and Development
Street address 60 Leonard Avenue, 7KD-430
City Toronto
State/province ON
ZIP/Postal code M5T 2S8
Country Canada
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (6)
GSM6836414 C1
GSM6836415 C2
GSM6836416 C3
Relations
BioProject PRJNA912215

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE220988_RAW.tar 960.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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