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Series GSE219015 Query DataSets for GSE219015
Status Public on Nov 18, 2023
Title Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
The main processed data are organized in the following two Figshare links:
Seurat objects: https://doi.org/10.6084/m9.figshare.23290004
ReDeeM-V output: https://doi.org/10.6084/m9.figshare.24418966.v1
 
Overall design Refer to individual Series
 
Citation(s) 38253266
Submission date Nov 29, 2022
Last update date Mar 09, 2024
Contact name Chen Weng
E-mail(s) cweng@wi.mit.edu
Organization name Broad Institute and Whitehead Institute
Department Genetics
Lab Vijay Sankaran lab and Jonathan Weissman lab
Street address 415 Main St, Cambridge
City Boston
State/province OH
ZIP/Postal code 02139
Country USA
 
Platforms (2)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (56)
GSM6764995 Donor Aged1, BMMCs, mRNA-derived cDNA, sample 10
GSM6764996 Donor Aged1, BMMCs, ATAC, sample 10
GSM6764997 Donor Aged1, BMMCs, mitochondrial DNA , sample 10
This SuperSeries is composed of the following SubSeries:
GSE219014 Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 1]
GSE219057 Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 2]
GSE219106 Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Young 1]
Relations
BioProject PRJNA906587

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE219015_RAW.tar 11.8 Gb (http)(custom) TAR (of H5, RDS, TAR, TSV, TXT)
SRA Run SelectorHelp

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