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Series GSE218198 Query DataSets for GSE218198
Status Public on Nov 10, 2023
Title Transcriptomic analysis of human dermal fibroblasts overexpressing ANKRD1.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Stromal cell senescence plays a crucial role in activating cancer-associated fibroblasts (CAFs). The Androgen receptor (AR) function oversees cellular senescence and CAF activation. Here, we identify the mesenchymal-specific transcriptional coregulator ANKRD1 as a key driver of CAF conversion. ANKRD1 is strongly upregulated in CAFs and under direct negative control of AR, and its loss impairs the pro-tumorigenic potential of CAFs. ANKRD1 controls a CAF-specific gene expression program and is associated with poorer survival of HNSCC, lung, and cervical SCC patients. Mechanistically, ANKRD1 binds to the chromatin on CAF gene regulatory regions in a complex with the AP1 transcription factor family. We show that ANKRD1 enhances the AP1 DNA binding activity to CAF gene promoters. Targeting ANKRD1 with the FANA antisense oligonucleotides reverts CAFs into a normal fibroblast, disrupts AP1 complex formation, and blocks CAF’s pro-tumorigenic potential in an orthotopic model of SCC, thus representing an exciting target for stroma-oriented cancer therapy.
 
Overall design Human dermal fibrloblasts with ANKRD1 overexpression versus control were run in triplicates.
 
Contributor(s) Luigi M, Dotto GP
Citation(s) 38310103
Submission date Nov 17, 2022
Last update date Feb 09, 2024
Contact name Paola Ostano
Organization name Fondazione Edo ed Elvo Tempia
Street address via Malta 3
City Biella
ZIP/Postal code 13900
Country Italy
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (6)
GSM6736379 ANKRD1 overepxression - rep1
GSM6736380 control - rep1
GSM6736381 ANKRD1 overepxression - rep2
Relations
BioProject PRJNA902731

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Supplementary file Size Download File type/resource
GSE218198_RAW.tar 140.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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