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Series GSE218075 Query DataSets for GSE218075
Status Public on Jun 05, 2024
Title Membrane phospholipid remodeling modulates nonalcoholic steatohepatitis progression by regulating mitochondrial homeostasis.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background and aims: NASH, characterized by inflammation and fibrosis, is emerging as a leading etiology of HCC. Lipidomics analyses in the liver have shown that the levels of polyunsaturated phosphatidylcholine (PC) are decreased in patients with NASH, but the roles of membrane PC composition in the pathogenesis of NASH have not been investigated. Lysophosphatidylcholine acyltransferase 3 (LPCAT3), a phospholipid (PL) remodeling enzyme that produces polyunsaturated PLs, is a major determinant of membrane PC content in the liver.

Approach and results: The expression of LPCAT3 and the correlation between its expression and NASH severity were analyzed in human patient samples. We examined the effect of Lpcat3 deficiency on NASH progression using Lpcat3 liver-specific knockout (LKO) mice. RNA sequencing, lipidomics, and metabolomics were performed in liver samples. Primary hepatocytes and hepatic cell lines were used for in vitro analyses. We showed that LPCAT3 was dramatically suppressed in human NASH livers, and its expression was inversely correlated with NAFLD activity score and fibrosis stage. Loss of Lpcat3 in mouse liver promotes both spontaneous and diet-induced NASH/HCC. Mechanistically, Lpcat3 deficiency enhances reactive oxygen species production due to impaired mitochondrial homeostasis. Loss of Lpcat3 increases inner mitochondrial membrane PL saturation and elevates stress-induced autophagy, resulting in reduced mitochondrial content and increased fragmentation. Furthermore, overexpression of Lpcat3 in the liver ameliorates inflammation and fibrosis of NASH.

Conclusions: These results demonstrate that membrane PL composition modulates the progression of NASH and that manipulating LPCAT3 expression could be an effective therapeutic for NASH.
 
Overall design Both Lpcat3 liver knockout (LKO) and control mice fed with NASH diet for 12 weeks were used for liver RNA sequencing. LKO and Con groups contain 5 mice each (GSM6734249-GSM6734258). Lpcat3 vs eGFP are mice injected with AAV expressing either eGFP control or Lpcat3 for overexpression. Mice were fed with NASH diet before RNA sequencing. Detailed study design was discussed in the paper (PMID: 36999536).
 
Citation(s) 36999536
Submission date Nov 16, 2022
Last update date Jun 05, 2024
Contact name Ye Tian
E-mail(s) yet4@illinois.edu
Phone 2178196130
Organization name University of Illinois ar Urbana-Champaign
Department Comparative Biosciences
Street address 2001 South Lincoln Avenue, room 3612
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (18)
GSM6734249 Liver_CON_NASH_1 [A54N]
GSM6734250 Liver_CON_NASH_2 [A55R]
GSM6734251 Liver_CON_NASH_3 [A55L]
This SuperSeries is composed of the following SubSeries:
GSE218073 Membrane phospholipid remodeling modulates nonalcoholic steatohepatitis progression by regulating mitochondrial homeostasis [LKO_NASH]
GSE218074 Membrane phospholipid remodeling modulates nonalcoholic steatohepatitis progression by regulating mitochondrial homeostasis [Lpcat3_OE]
Relations
BioProject PRJNA902270

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