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Series GSE217727 Query DataSets for GSE217727
Status Public on May 18, 2023
Title Gene expression profiles at the single cell level of cochlear cells from C57BL/6J mice at both embryonic day 15 and postnatal day 7
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Otic Mesenchyme Cells (OMCs) are the numerous cell type during cochlear development. We used single cell RNA sequencing (scRNA-seq) to analyze the diversity of OMCs during cochlear development
 
Overall design Whole cochleae were harvested from either E15 or P7 C57BL/6J mice and single cell transcriptomics was completed with the 10x Genomics platform.
 
Contributor(s) Rose K, Hertzano R, Coate T, Song Y
Citation(s) 37720106
Submission date Nov 10, 2022
Last update date Sep 21, 2023
Contact name Kevin Rose
E-mail(s) rosekp@umaryland.edu
Organization name University of Maryland, Baltimore
Department OTO-HNS
Lab Ronna Hertzano
Street address 670 West Baltimore Street
City Baltimore
ZIP/Postal code 21201
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM6725540 P7 C57BL/6J Cochlea
GSM6725541 E15 C57BL/6J Cochlea 1
GSM6725542 E15 C57BL/6J Cochlea 2
Relations
BioProject PRJNA900232

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217727_RAW.tar 170.7 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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