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Series GSE216393 Query DataSets for GSE216393
Status Public on Oct 31, 2022
Title Gene expression profile of macrophages in aneurysm lesions at the growth phase.
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Recent experimental studies have defined intracranial aneurysms as a macrophage-mediated chronic inflammatory disease affecting intracranial arteries. We used single cell RNA sequencing (scRNA-seq) to analyze the population of macrophages in aneurysm lesions at the growth phase.
 
Overall design The previously-established aneurysm model of rats was used. Macrophages were labeled with the fluorescent protein and isolated by a laser-microdissection method and analyzed using scRNAseq.
 
Contributor(s) Tomohiro A
Citation(s) 36323172
Submission date Oct 24, 2022
Last update date Jan 30, 2023
Contact name Akihiro Okada
E-mail(s) aokada6@kuhp.kyoto-u.ac.jp
Organization name National Cerebral and Cardiovascular Center
Department Department of Molecular Pharmacology
Street address 6-1 Kishibe-Shinmachi
City Suita City
State/province Osaka
ZIP/Postal code 564-8565
Country Japan
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (52)
GSM6671899 Aneurysm 1-1: macrophage, scRNAseq
GSM6671900 Aneurysm 1-2: macrophage, scRNAseq
GSM6671901 Aneurysm 1-3: macrophage, scRNAseq
Relations
BioProject PRJNA893533

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216393_Macrophages_in_aneurysm_lesions.xlsx 3.6 Mb (ftp)(http) XLSX
GSE216393_barcode_information.xls.gz 9.4 Kb (ftp)(http) XLS
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