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Series GSE216356 Query DataSets for GSE216356
Status Public on Nov 23, 2022
Title Amino acid intake strategies define pluripotent cell states
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq of mouse embryonic stem cells undergoing exit from pluripotency
 
Overall design Comparative genomic profiling of mouse embryonic stem cells cultured in either 2i/LIF or serum/LIF + 2i media and induced to exit from naïve pluripotency for 12, 24, or 40 hours. 0 hour samples serve as controls.
 
Contributor(s) Jackson BT, Paras KI, Finley LW
Citation(s) 38172382
Submission date Oct 22, 2022
Last update date Jan 08, 2024
Contact name Lydia Finley
E-mail(s) finleyl@mskcc.org
Organization name Memorial Sloan Kettering Cancer Center
Department Cell Biology Program
Street address 430 E 67th St
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (16)
GSM6670900 2iLIF_0hr_1
GSM6670901 2iLIF_0hr_2
GSM6670902 2iLIF_12hr_1
Relations
BioProject PRJNA893209

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216356_Jackson_mESC_exit_RNA-seq_raw_counts.csv.gz 722.0 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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