|
| Status |
Public on Oct 20, 2022 |
| Title |
Rapid gene content turnover on the germline-restricted chromosome in songbirds |
| Organisms |
Luscinia megarhynchos; Luscinia luscinia |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We compared assembled germline-restricted chromosmomes (GRCs) from two closely related songbird species (Luscinia megarhynchos and Luscinia luscinia) including the expression analysis of GRC genes
|
| |
|
| Overall design |
The comparisson of expressed GRC genes from two nightingale species using mRNA-seq data
|
| |
|
| Contributor(s) |
Schlebusch SA, Ridl J, Reifova R |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Oct 17, 2022 |
| Last update date |
Oct 20, 2022 |
| Contact name |
Jakub Ridl |
| E-mail(s) |
jakub.ridl@img.cas.cz, jakub.ridl@gmail.com
|
| Organization name |
Institute of Molecular Genetics of the Czech Academy of Sciences
|
| Lab |
Laboratory of Genomics and Bioinformatics
|
| Street address |
Vídeňská 1083
|
| City |
Prague |
| ZIP/Postal code |
14220 |
| Country |
Czech Republic |
| |
|
| Platforms (2) |
| GPL32750 |
Illumina HiSeq 2500 (Luscinia megarhynchos) |
| GPL32751 |
Illumina HiSeq 2500 (Luscinia luscinia) |
|
| Samples (4)
|
| GSM6645411 |
Luscinia megarhynchos LM30, DNA depleted mRNA from ovaries |
| GSM6645412 |
Luscinia megarhynchos LM14, DNA depleted mRNA from testis |
| GSM6645413 |
Luscinia luscinia LL32, DNA depleted mRNA from ovaries |
| GSM6645414 |
Luscinia luscinia LL22, DNA depleted mRNA from testis |
|
| Relations |
| BioProject |
PRJNA891261 |
Less...
More...