NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE2150 Query DataSets for GSE2150
Status Public on Apr 01, 2005
Title Rhodobacter sphaeroides respiration and photosynthesis
Platform organism Cereibacter sphaeroides 2.4.1
Sample organism Cereibacter sphaeroides
Experiment type Expression profiling by array
Summary This series contains two subsets of samples not being directly compared. The two subsets are:

GSE2145: 30% O2 vs PS 10W/m2
GSE2146: CT01 vs wild-type at 3% O2

Below results represent the K-means (K=4) clustering analysis using GeneSpring software.
The list contains genes/ORFs contained in each of the 4 clusters.
Keywords: other
 
 
Contributor(s) Tavano CL, Donohue TJ, Anthony JW
Citation(s) 16030219
Submission date Jan 12, 2005
Last update date Apr 26, 2014
Contact name Timothy J Donohue
E-mail(s) tdonohue@bact.wisc.edu
Phone 608-265-8465
Organization name University of Wisconsin - Madison
Department Bacteriology
Lab Timothy Donohue
Street address 1552 University Avenue
City Madison
State/province WI
ZIP/Postal code 53726
Country USA
 
Platforms (1)
GPL162 [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip
Samples (12)
GSM38773 2.4.1-1
GSM38774 2.4.1-3
GSM38775 P3
Relations
BioProject PRJNA91409

ORFs in Clusters 1-4 header descriptions
ID
Name
Description

Data table
ID Name Description
Cluster 1
FlgIWS8
FlgJWS8
FlgKWS8
FliCWS8
FliHWS8
FliPWS8
G2RS0058-RS0059
GRS0058-RS0059
M2RS0036-RS0040
MRS0034a-RS0035
MRS0069a-RS0071
RSP0031
RSP0033 ATP/GTP-binding site motif A (P-loop)
RSP0034 flhA Probable FlhA
RSP0035 conserved hypothetical protein
RSP0037 flgM Putative FlgM, negative regulator of flagellin synthesis.
RSP0038 hypothetical
RSP0040 fliS putative flagellar protein FliS
RSP0042 cheA3 Chemotaxis histidine protein kinase, CheA3

Total number of rows: 285

Table truncated, full table size 10 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE2150_RAW.tar 15.6 Mb (http)(custom) TAR (of CEL, EXP, RPT)

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap