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Series GSE214970 Query DataSets for GSE214970
Status Public on Jul 14, 2024
Title Amino acids fuel FLS activation and arthritis by regulating chemokine expression and leukocyte migration
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary mTOR plays a significant role in synovial inflammation and suggests that dietary interventions and nutrient availability may influence arthritis severity and disease outcomes. In this study, we tested the effect of AA deprivation on the inflammatory activity of RA FLS and found that AAs specifically influence the expression of a gene set that regulates leukocyte chemotaxis. Using a murine model of inflammatory arthritis, we further demonstrate that low protein diet resulted in amelioration of objective measures of joint inflammation due to a reduced accumulation of inflammatory cells in their joints.
 
Overall design Fibroblast-like synoviocytes were stimulated with the prototypic inflammatory stimulus TNF in the presence or absence of AAs in the culture medium and analysed transcriptional responses by RNA-sequencing.
 
Contributor(s) Karonitsch T, Blüml S, Heller G
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Submission date Oct 06, 2022
Last update date Jul 14, 2024
Contact name Gerwin Heller
E-mail(s) gerwin.heller@meduniwien.ac.at
Organization name Medical University of Vienna
Department Medicine I
Street address Währinger Gürtel 18-20
City Wien
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (95)
GSM6619304 merged_39_0S56768
GSM6619305 merged_40_0S56770
GSM6619306 merged_41_0S56769
Relations
BioProject PRJNA887808

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214970_RNA_seq_count_table.xlsx 15.3 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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