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| Status |
Public on Apr 17, 2011 |
| Title |
Gene expression during SMC cord morphogenesis |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
SMCs must undergo specialzed patterning during blood vessel stabilization. We used microarray analysis to identify differentially expressed genes as smooth muscle cells were induced to assemble into a network of elongated cords.
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| Overall design |
Two time points (Day 0 and Day 8) and three biological replicates for each, using Affymetrix HGU133A and HGU133B arrays for each sample.
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| Contributor(s) |
Pickering JG, Frontini MJ |
| Citation(s) |
21499246, 25767275 |
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| Submission date |
Apr 16, 2010 |
| Last update date |
Aug 10, 2018 |
| Contact name |
J. Geoffrey Pickering |
| E-mail(s) |
gpickering@robarts.ca
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| Organization name |
Robarts Research Institute
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| Street address |
100 Perth Drive
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| City |
London |
| State/province |
ON |
| ZIP/Postal code |
N6A5K8 |
| Country |
Canada |
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| Platforms (2) |
| GPL96 |
[HG-U133A] Affymetrix Human Genome U133A Array |
| GPL97 |
[HG-U133B] Affymetrix Human Genome U133B Array |
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| Samples (12)
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| GSM533844 |
HITC6, Day 0 biological replicate 1, Affy103A |
| GSM533845 |
HITC6, Day 0 biological replicate 2, Affy118A |
| GSM533846 |
HITC6, Day 0 biological replicate 3, Affy149A |
| GSM533847 |
HITC6, Day 8 biological replicate 1, Affy107A |
| GSM533848 |
HITC6, Day 8 biological replicate 2, Affy122A |
| GSM533849 |
HITC6, Day 8 biological replicate 3, Affy153A |
| GSM533850 |
HITC6, Day 0 biological replicate 1, Affy103B |
| GSM533851 |
HITC6, Day 0 biological replicate 2, Affy118B |
| GSM533852 |
HITC6, Day 0 biological replicate 3, Affy149B |
| GSM533853 |
HITC6, Day 8 biological replicate 1, Affy107B |
| GSM533854 |
HITC6, Day 8 biological replicate 2, Affy122B |
| GSM533855 |
HITC6, Day 8 biological replicate 3, Affy153B |
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| Relations |
| BioProject |
PRJNA126103 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE21363_RAW.tar |
42.0 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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