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Series GSE213360 Query DataSets for GSE213360
Status Public on Jun 13, 2024
Title A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma
Organisms Danio rerio; Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Sep 14, 2022
Last update date Jun 14, 2024
Contact name Leonard Zon
E-mail(s) zon@enders.tch.harvard.edu
Organization name Boston Children's Hospital
Department Oncology/Hematology
Street address 1 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (3)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL20828 Illumina NextSeq 500 (Danio rerio)
GPL21741 Illumina HiSeq 4000 (Danio rerio)
Samples (40)
GSM6578998 Vehicle Control A375 INPUT 6.11.18
GSM6578999 TGFB1 stimulated A375 INPUT 6.11.18
GSM6579000 Vehicle Control A375 H3K27ac 6.11.18
This SuperSeries is composed of the following SubSeries:
GSE213326 A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma [ChIP-seq]
GSE213327 A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma [RNA-seq, A375]
GSE213328 A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma [RNA-seq, ZMEL]
Relations
BioProject PRJNA880593

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE213360_RAW.tar 21.1 Mb (http)(custom) TAR (of NARROWPEAK, TSV)
SRA Run SelectorHelp

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