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Series GSE212139 Query DataSets for GSE212139
Status Public on Aug 31, 2022
Title Identification and analysis of microRNA editing events in recurrent bladder cancer based on RNA sequencing: microRNA editing level is a potential novel biomarker
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary To identify and compare miRNA editing events in primary and recurrent bladder cancer, as well as to investigate the potential molecular mechanism and its impact on patient prognosis. We examined the mRNA and miRNA transcriptomes of 12 recurrent bladder cancer cases and 13 primary bladder cancer cases.
 
Overall design In this study, we performed RNA sequencing on tissue specimens from 25 bladder cancer(BC) patients (12 recurrent BC and 13 primary BC) and performed a comprehensive analysis of mRNAseq and miRNAseq to determine miRNA editing in bladder cancer.
 
Contributor(s) Qin J, Shi Z, Han C
Citation(s) 36199571
Submission date Aug 26, 2022
Last update date Oct 27, 2022
Contact name Jiaxin Qin
E-mail(s) a310960@126.com
Organization name Department of Urology, Xuzhou Clinical College of Xuzhou Medical University, Xuzhou, Jiangsu, China
Street address Jiefang South Road, No. 199, Xuzhou, Jiangsu, China
City Xuzhou
ZIP/Postal code 221009
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (35)
GSM6510027 miRNA-seq NEW1
GSM6510028 miRNA-seq NEW2
GSM6510029 miRNA-seq NEW3
Relations
BioProject PRJNA874087

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212139_miRNA_expression.csv.gz 9.5 Kb (ftp)(http) CSV
GSE212139_rawcounts.csv.gz 198.4 Kb (ftp)(http) CSV
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Processed data are available on Series record

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