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Series GSE211450 Query DataSets for GSE211450
Status Public on Jan 30, 2023
Title Landscape of Prostate-Specific Membrane Antigen Heterogeneity in Metastatic Prostate Cancer II
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Prostate-specific membrane antigen (PSMA) has emerged as an important therapeutic target in metastatic castration-resistant prostate cancer (CRPC). However, not all patients respond to PSMA-targeted therapy, in part due to heterogeneity of tumor expression of the target PSMA. Furthermore, loss of PSMA expression develops in up to 15-20% of patients with CRPC, and the underlying mechanisms remain poorly defined. In this study, we developed an orthotopic xenograft model of CRPC using 22Rv1 cell line, we observed lower PSMA expression in liver lesions versus other sites of metastatic disease, suggesting a potential role of the microenvironment in modulating PSMA expression. To facilitate investigation of PSMA-suppression, we cultured and immortalized a liver metastasis of 22Rv1 metastatic xenograft model in vitro as a new cell line (22Rv1-LMD) which remained AR-positive and PSMA-negative.
 
Overall design Three biological replicates were analyzed for each of 3 conditions including wild type (WT) and Liver drived cell line (LV).
 
Contributor(s) Bakht MK, Beltran H
Citation(s) 37038004
Submission date Aug 17, 2022
Last update date May 01, 2023
Contact name Himisha Beltran
E-mail(s) himisha_beltran@dfci.harvard.edu
Phone 6175829421
Organization name Dana Farber Cancer Institute
Department Department of Medical Oncology
Street address 450 Brookline Ave
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM6472510 22Rv1, Control, rep1
GSM6472511 22Rv1, Control, rep2
GSM6472512 22Rv1, Control, rep3
This SubSeries is part of SuperSeries:
GSE211452 Landscape of prostate-specific membrane antigen heterogeneity and regulation in AR-positive and AR-negative metastatic prostate cancer
Relations
BioProject PRJNA870438

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211450_RAW.tar 26.1 Mb (http)(custom) TAR (of TXT)
GSE211450_TPM_22Rv1_cell_line_model.csv.gz 1.5 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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