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GEO accession:
Series GSE210568
Query DataSets for GSE210568
Status
Public on Aug 04, 2022
Title
Multi-omic analysis by single-cell sequencing of epigenomic state in pediatric H3K27M gliomas
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36471070
Submission date
Aug 04, 2022
Last update date
Dec 01, 2023
Contact name
Claudia L Kleinman
E-mail(s)
claudia.kleinman@mcgill.ca
Phone
514-340-8222 25139
Organization name
Lady Davis Institute for Medical Research
Department
Human Genetics
Street address
3999 Côte Ste-Catherine Road
City
Montréal
State/province
Québec
ZIP/Postal code
H3T 1E2
Country
Canada
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (61)
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More...
GSM6432679
P-1764_S-1766_ATAC
GSM6432680
P-2687_S-2688_ATAC
GSM6432681
P-6253_S-8498_ATAC
GSM6432682
P-6255_S-8500_ATAC
GSM6432683
P-1694_S-1694_multiome RNA
GSM6432684
P-1701_S-1701_multiome RNA
GSM6432685
P-1709_S-1709_multiome RNA
GSM6432686
P-1764_S-1766_multiome RNA
GSM6432687
P-1779_S-1781_multiome RNA
GSM6432688
P-1780_S-1780_multiome RNA
GSM6432689
P-6253_S-8498_multiome RNA
GSM6432690
P-6337_S-8821_multiome RNA
GSM6432691
P-6640_S-9581_multiome RNA
GSM6432692
P-6774_S-10146_multiome RNA
GSM6432693
P-1694_S-1694_multiome ATAC
GSM6432694
P-1701_S-1701_multiome ATAC
GSM6432695
P-1709_S-1709_multiome ATAC
GSM6432696
P-1764_S-1766_multiome ATAC
GSM6432697
P-1779_S-1781_multiome ATAC
GSM6432698
P-1780_S-1780_multiome ATAC
GSM6432699
P-6253_S-8498_multiome ATAC
GSM6432700
P-6337_S-8821_multiome ATAC
GSM6432701
P-6640_S-9581_multiome ATAC
GSM6432702
P-6774_S-10146_multiome ATAC
GSM6432703
BT2016062
GSM6432704
BT2018022
GSM6432705
P-1190_S-1197
GSM6432706
P-1569_S-1569
GSM6432707
P-1713_S-1713
GSM6432708
P-1741_S-2756
GSM6432709
P-1764_S-1766
GSM6432710
P-1775_S-1775
GSM6432711
P-1969_S-3584
GSM6432712
P-2077_S-2077
GSM6432713
P-2687_S-2688
GSM6432714
P-3198_S-3199
GSM6432715
P-3200_S-3254
GSM6432716
P-3200_S-3867
GSM6432717
P-3387_S-3411
GSM6432718
P-3407_S-3447
GSM6432719
P-4198_S-4459
GSM6432720
P-4504_S-4916
GSM6432721
P-5099_S-6218
GSM6432722
P-5613_S-7162
GSM6432723
P-6117_S-8370
GSM6432724
P-6166_S-8321
GSM6432725
P-6240_S-8628
GSM6432726
P-6251_S-8496
GSM6432727
P-6253_S-8498
GSM6432728
P-6254_S-8499
GSM6432729
P-6255_S-8500
GSM6432730
P-6292_S-8579
GSM6432731
P-6308_S-8632
GSM6432732
P-6328_S-8672
GSM6432733
P-6329_S-8673
GSM6432734
P-6331_S-8904
GSM6432735
P-6337_S-8821
GSM6432736
P-6388_S-8770
GSM6432737
P-6431_S-8842
GSM6432738
P-6519_S-9084
GSM6432739
P-6640_S-9581
This SuperSeries is composed of the following SubSeries:
GSE210565
Multi-omic analysis of cell-of-origin and epigenomic state in pediatric H3K27M gliomas (scATAC-Seq)
GSE210566
Multi-omic analysis of cell-of-origin and epigenomic state in pediatric H3K27M gliomas (multiome)
GSE210567
Multi-omic analysis of cell-of-origin and epigenomic state in pediatric H3K27M gliomas (scRNA-Seq)
Relations
BioProject
PRJNA866172
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE210568_RAW.tar
15.3 Gb
(http)
(custom)
TAR (of BED, BW, MTX, TSV)
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