NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE210187 Query DataSets for GSE210187
Status Public on Jul 31, 2024
Title Regulation of blood-brain barrier by astrocyte through mitochondrial transfer.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Previous data revealed the role of Mfn2 in mediating mitochondrial transfer from a subset of astrocytes that express Dmp1 to cerebrovascular endothelial cells. We used scRNA-seq to investigate the role of Mfn2-mediated mitochondrial transfer in endothelial cell functions.
 
Overall design Mfn2 was conditionally depleted in astrocytesDMP1 by establishing Dmp1Cre-Mfn2flox/flox transgenic mice with Dmp1Cre and Mfn2flox/flox mouse lineages. Next, 3 wild type (WT) mouse brains and 3 age-matched Dmp1Cre-Mfn2flox/flox mouse brains were digested into single cells by standard protocols and mixed into one sample, respectively. Mixed single cells from WT mouse brains and Dmp1Cre-Mfn2flox/flox mouse brains were processed for further scRNA sequencing.
 
Contributor(s) Gao J, Liu D
Citation(s) 38941455
Submission date Aug 01, 2022
Last update date Aug 01, 2024
Contact name Junjie Gao
E-mail(s) Junjie.gao@shsmu.edu.cn
Phone +8615067175608
Organization name Shanghai Jiao Tong University Affiliated Shanghai Sixth People’s Hospital
Street address 600 Yishan Road
City Shanghai
ZIP/Postal code 200233
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM6423085 WT-Brains, replicate 1, scRNA-seq
GSM6423086 Dmp1Cre-Mfn2flox/flox-Brains, replicate 1, scRNA-seq
Relations
BioProject PRJNA864662

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210187_RAW.tar 147.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap