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Series GSE208772 Query DataSets for GSE208772
Status Public on Feb 26, 2024
Title RNA-seq for blood Ly6Chi and Ly6Clo monocyte in WT and RBP-Jfl/fl Lyz2-Cre mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To evaluate the consequences of RBP-J loss of function in blood monocyte subsets, we sequenced RNA of blood Ly6Chi monocyte and Ly6Clo monocyte from WT and RBP-Jfl/fl Lyz2-Cre mice.
 
Overall design Blood Ly6Chi and Ly6Clo monocytes were isolated from WT and RBP-Jfl/fl Lyz2-Cre mice, and total RNA was extracted using total RNA purification kit. RNA was converted into RNA-seq quantification libraries, and RNA-seq libraries were sequenced with the pair-end option.
 
Contributor(s) Kang L, Zhang B, Kou T
Citation(s) 38407952
Submission date Jul 21, 2022
Last update date Mar 20, 2024
Contact name Tiantian Kou
Organization name Tsinghua university
Street address Haidian District
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM6369150 WT blood Ly6Clo monocyte
GSM6369151 WT blood Ly6Chi monocyte
GSM6369152 RBP-Jfl/fl Lyz2-Cre blood Ly6Clo monocyte
Relations
BioProject PRJNA860977

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE208772_gene_expression.txt.gz 4.4 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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