NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE208335 Query DataSets for GSE208335
Status Public on Jan 01, 2023
Title Gene expression analyses of HUVECs treated with conditioned medium derived from bone marrow mesenchymal stromal cells (BMSC-CM)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary A functional vascular system is a prerequisite for bone repair as disturbed angiogenesis often causes non-union. Paracrine factors released from human bone marrow mesenchymal stromal cells (BMSCs) have angiogenic effects on endothelial cells. However, whether these paracrine factors participate in blood flow dynamics within bone capillaries remains poorly understood. Here, we used two different microfluidic designs to investigate critical steps during angiogenesis and found pronounced effects of endothelial cell proliferation as well as chemotactic and mechanotactic migration induced by BMSC conditioned medium (CM). The application of BMSC-CM in dynamic cultures demonstrates that bioactive factors in combination with fluidic flow-induced biomechanical signals significantly enhanced endothelial cell migration. Transcriptional analyses of endothelial cells demonstrate the induction of a unique gene expression profile related to tricarboxylic acid cycle and energy metabolism by the combination of BMSC-CM factors and shear stress, which opens an interesting new avenue to explore during fracture healing. Our results stress the importance of in vivo - like microenvironments simultaneously including biochemical, biomechanical and oxygen levels when investigating key events during vessel repair.
 
Overall design HUVECs were incubated with BMSC-CM in static culture and dynamic culture for 24 hours and gene expression profiles were generated.
 
Contributor(s) Zhang S, van de Peppel J, van der Eerden B
Citation(s) 35995408
Submission date Jul 16, 2022
Last update date Apr 02, 2023
Contact name Jeroen van de Peppel
E-mail(s) h.vandepeppel@erasmusmc.nl
Organization name ErasmusMC
Street address 's Gravendijkwal 230
City Rotterdam
ZIP/Postal code 3015 CE
Country Netherlands
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (12)
GSM6341175 Dynamic HUVECs -Control 1
GSM6341176 Dynamic HUVECs -Control 2
GSM6341177 Dynamic HUVECs -Control 3
Relations
BioProject PRJNA859380

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE208335_RAW.tar 3.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap