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Series GSE207979 Query DataSets for GSE207979
Status Public on May 09, 2023
Title Intrinsically determined turnover underlies broad heterogeneity in plasma-cell lifespan
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Antibody persistence frequently determines the longevity of immunity, yet the mechanisms that set antibody-producing plasma cell turnover rates are unestablished. While it is proposed that new plasma cells displace existing ones in competition for specialised survival niches, it is also possible that the spontaneous loss of existing plasma cells frees niches thereby creating opportunities for recruitment, possibilities with quite different implications for maximising antibody production and persistence. Here, using a genetic reporter to timestamp plasma cells, we define the distribution, phenotype, transcriptional program and population structure of long-lived plasma cells and calculate turnover dynamics. We show that the attributes of longevity are acquired and that turnover of long-lived plasma cells at homeostasis is unaffected by the absence of B cells, indicating that the mechanism of turnover is independent of competition. We propose that understanding plasma cell population dynamics may allow their manipulation to achieve specific outcomes.
 
Overall design BLTcre.mcl1fl/+ reporter mice were given tamoxifen to trigger the expression of human CD4 reporter gene. Single cell whole transcriptome profiles of human CD4+ and human CD4- plasma cells sorted from BLTcre.mcl1fl/+ reporter mice 128 days after tamoxifen treatment
 
Contributor(s) Robinson MJ, Ding Z, McKenzie C, Wong N, Tarlinton DM
Citation(s) 37164016
Submission date Jul 12, 2022
Last update date Aug 08, 2023
Contact name Zhoujie Ding
Organization name Monash University
Street address 89 Commercial Road
City Melbourne
State/province VIC
ZIP/Postal code 3004
Country Australia
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (1)
GSM6329502 day 128_bone marrow plasma cells
This SubSeries is part of SuperSeries:
GSE207980 Intrinsically determined turnover underlies broad heterogeneity in plasma-cell lifespan
Relations
BioProject PRJNA857895

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SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GSE207979_Combined_ZD_MR_cartridge2_RSEC_MolsPerCell.csv.gz 14.7 Mb (ftp)(http) CSV
GSE207979_ZD_MR_cartridge2_Sample_Tag_Calls.csv.gz 27.5 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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