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Series GSE207180 Query DataSets for GSE207180
Status Public on Jul 02, 2022
Title Transcriptomic analysis of VBNC cells of osmostressed Bacillus subtilis 168
Organism Bacillus subtilis
Experiment type Expression profiling by high throughput sequencing
Summary Characterization of the putative genetic determinants of the VBNC state in a known spore-forming Gram-positive organism Bacillus subtilis 168. The VBNC state was induced under osmotic stress and aminoglycoside treatment. The transcriptome landscape of VBNC cells was compared to the viable, antibiotic sensitive B. subtilis cells and to the viable cells with no antibiotic treatment.
 
Overall design 9 samples, 3 biological replicates for each studied condition
 
Contributor(s) Morawska LP, Kuipers OP
Citation(s) 36289289
Submission date Jun 29, 2022
Last update date Nov 02, 2022
Contact name Anne de Jong
E-mail(s) anne.de.jong@rug.nl
Phone +31 50 363 2047
Organization name university of Groningen
Department Molecular Genetics
Street address Nijenborgh 7
City Groningen
ZIP/Postal code 9747 AG
Country Netherlands
 
Platforms (1)
GPL28092 NextSeq 550 (Bacillus subtilis)
Samples (9)
GSM6280861 control 1
GSM6280862 control 2
GSM6280863 control 3
Relations
BioProject PRJNA854068

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE207180_RAW.tar 600.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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