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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 08, 2022 |
| Title |
ESE1/AGR2 axis antagonizes TGF-β-induced epithelial-mesenchymal transition in pancreatic cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To investigate the function of ESE1 in the epithelial-mesenchymal, we established L3.6 cell lines in which target gene has been knocked down by shRNA.We then performed gene expression profiling analysis using data obtained from RNA-seq of 2 different cells at the same time points.
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data forL3.6 cells and its knockdown derivatives (shESE1).
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| Contributor(s) |
Xu H, Bai J, Chen A, Tian Y, Feng X, Wang J, Wu J, Jin X, Zhang F, Quan M, Chen C, Lee K, Zhang J |
| Citation(s) |
36329620 |
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| Submission date |
Jun 27, 2022 |
| Last update date |
Nov 09, 2022 |
| Contact name |
Huijing Xu |
| E-mail(s) |
renyunqingzheng@126.com
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| Phone |
15944279472
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| Organization name |
Wenzhou Medical unversity
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| Street address |
Chashan University Park
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| City |
Wenzhou |
| State/province |
Zhejiang |
| ZIP/Postal code |
325035 |
| Country |
China |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA853279 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE206999_RAW.tar |
22.5 Mb |
(http)(custom) |
TAR (of XLSX) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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