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Series GSE206889 Query DataSets for GSE206889
Status Public on Jun 20, 2023
Title The quorum-sensing agr system protects Staphylococcus aureus from oxidative stress (5 hour growth)
Organism Staphylococcus aureus
Experiment type Expression profiling by high throughput sequencing
Summary The agr quorum-sensing system clearly links Staphylococcus aureus metabolism to virulence, but little is known about how agr alters metabolism to affect cell survival during severe stress. Recently, we reported that agr activity increases survival of bacteria during treatment with lethal concentrations of H2O2, a crucial host defense against S. aureus.  Here we report that protection by agr extends to growth resumption during the exit from stationary phase. The data indicate that the agr functionality of a cell’s ancestor affects stress-resiliency after resuming growth.  Protection against killing by H2O2 depended on the agr effector molecule RNAIII and Rot, a transcription factor targeted by RNAIII. Expression data revealed that Δagr strains shift to fermentation, suggesting that agr promotes aerobic respiration. Epistasis between mutation of agr and sortase, which anchors surface proteins to the cell wall, suggested that reduced killing by H2O2 of wild-type agr strains acts through down-regulation of surface proteins that perturb respiration. Respiration generates reactive oxygen species (ROS), moderate amounts of which can protect from subsequent challenge by lethal concentrations, explaining agr-mediated protection against subsequent lethal H2O2 doses. Increased survival of wild-type agr cells in response to H2O2 required sodA, which dismutates O2-  to H2O2, suggesting that sodA helps induce the low, protective levels of ROS triggered by agr.  Additionally, detrimental effects of the Δagr mutation require ahpC, which functions to decrease the intracellular level of H2O2. Deletion of ahpC or sortase attenuated neutrophil-mediated killing of Δagr strains, demonstrating the importance of priming in anticipation of impending immune attack.
 
Overall design Six samples both LAC wild type and LAC agr KO
 
Contributor(s) Podkowik M, Shopsin B
Citation(s) 37333372, 38687677
Submission date Jun 24, 2022
Last update date May 24, 2024
Contact name Gregory Putzel
Organization name NYU Langone Health
Department Microbiology
Lab Pironti
Street address 430 East 29th Street
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL27158 Illumina NovaSeq 6000 (Staphylococcus aureus)
Samples (6)
GSM6266468 LAC isolate 1
GSM6266469 LAC isolate 2
GSM6266470 LAC isolate 3
This SubSeries is part of SuperSeries:
GSE207045 The quorum-sensing agr system protects Staphylococcus aureus from oxidative stress
Relations
BioProject PRJNA852568

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206889_gene_counts.tsv.gz 42.3 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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