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Series GSE206366 Query DataSets for GSE206366
Status Public on Jul 31, 2022
Title Ca2+ channels couple spiking to mitochondrial metabolism in substantia nigra dopaminergic neurons
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary How do neurons match generation of adenosine triphosphate (ATP) by mitochondria to the bioenergetic demands of regenerative activity? Although the subject of speculation, this coupling is still poorly understood, particularly in neurons that are tonically active. To help fill this gap, pacemaking substantia nigra dopaminergic neurons were studied using a combination of optical, electrophysiological and molecular approaches. In these neurons, spike-activated calcium (Ca2+) entry through Cav1 channels triggered Ca2+ release from the endoplasmic reticulum, which stimulated mitochondrial OXPHOS through two complementary Ca2+-dependent mechanisms: one mediated by the mitochondrial uniporter and another by the malate-aspartate shuttle. Disrupting either mechanism impaired the ability of dopaminergic neurons to sustain spike activity. While this feedforward control helps dopaminergic neurons meet the bioenergetic demands associated with sustained spiking, it also is responsible for their elevated oxidant stress and possibly to their decline with aging and disease.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data of MCU-KO and wildtype substantia nigra dopaminergic neurons selectively pulled-down with the RiboTag approach
 
Contributor(s) Zampese E, Wokosin DL, Gonzalez Rodriguez P, Guzman JN, Tkatch T, Kondapalli J, Surmeier WC, D'Alessandro KB, De Stefani D, Rizzuto R, Iino M, Molkentin JD, Chandel NS, Schumacker PT, Surmeier DJ
Citation(s) 36179023
Submission date Jun 17, 2022
Last update date Oct 31, 2022
Contact name Enrico Zampese
E-mail(s) enrico.zampese@gmail.com, enrico.zampese@northwestern.edu
Organization name Northwestern University
Department Neuroscience
Lab Surmeier Lab
Street address 303 E Superior st
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (16)
GSM6252653 control mouse 1
GSM6252654 control mouse 2
GSM6252655 control mouse 3
Relations
BioProject PRJNA850392

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206366_RAW.tar 1.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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