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Series GSE205436 Query DataSets for GSE205436
Status Public on Jun 21, 2024
Title Shared features of blastula and neural crest stem cells evolved at the base of vertebrates
Organisms Petromyzon marinus; Xenopus laevis
Experiment type Expression profiling by high throughput sequencing
Summary We address the evolutionary origins of vertebrate pluripotency by comparing the development of neural crest and blastula stem cells using representatives from both jawed (Xenopus) and jawless (lamprey) vertebrates.
 
Overall design We performed gene expression profiling of blastula stem cells and neural crest cells using RNA-Seq
Web link https://www.nature.com/articles/s41559-024-02476-8
 
Contributor(s) York JR, LaBonne C
Citation(s) 39060477
Submission date Jun 03, 2022
Last update date Sep 20, 2024
Contact name Joshua Ryan York
E-mail(s) joshua.york@northwestern.edu
Phone 4059214994
Organization name Northwestern University
Department Molecular Biosciences
Lab LaBonne
Street address 2205 Tech Dr
City Evanston
State/province Illinois
ZIP/Postal code 60208
Country USA
 
Platforms (2)
GPL21248 Illumina NextSeq 500 (Xenopus laevis)
GPL24750 Illumina NextSeq 500 (Petromyzon marinus)
Samples (21)
GSM6212633 Pm_caps_rep1_index16
GSM6212634 Pm_caps_rep2_index18
GSM6212635 Pm_caps_rep3_index20
Relations
BioProject PRJNA845214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205436_Pm_caps_counts.csv.gz 143.1 Kb (ftp)(http) CSV
GSE205436_aNC_timecourse_counts.csv.gz 982.7 Kb (ftp)(http) CSV
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Processed data are available on Series record

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