NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE205412 Query DataSets for GSE205412
Status Public on Jul 25, 2022
Title Slow-integrin dependent migration organizes networks of tissue-resident mast cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We performed single-cell RNA seqencing of mast cells from dermal skin using the mCEL-seq2 protocol.
 
Overall design We performed single-cell RNA seqencing of mast cells from dermal skin using the mCEL-seq2 protocol.
CEL-Seq2 (Hasimshony et al. 2016, Genome Biology, DOI: 10.1186/s13059-016-0938-8)
 
Contributor(s) Aizarani N, Lämmerman T, Bambach S, Grün D
Citation(s) 37081147
Submission date Jun 02, 2022
Last update date Aug 28, 2023
Contact name Nadim Aizarani
Organization name FMI
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (34)
GSM6211587 wt1_13
GSM6211588 wt1_14
GSM6211589 wt1_15
Relations
BioProject PRJNA844983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205412_RAW.tar 11.1 Mb (http)(custom) TAR (of CSV)
GSE205412_cellbarcodes_cellid.csv.gz 17.7 Kb (ftp)(http) CSV
GSE205412_cellbarcodes_cellid2.csv.gz 17.7 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap