|
| Status |
Public on Mar 28, 2023 |
| Title |
Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
37164949 |
| |
| Submission date |
May 26, 2022 |
| Last update date |
Aug 04, 2023 |
| Contact name |
Anthony Oro |
| Organization name |
Stanford University
|
| Department |
Dermatology
|
| Street address |
269 Campus Drvie
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (11)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE204863 |
Single-cell ATAC-Seq (scATAC-Seq) of mouse basal cell carcinoma (BCC) immune cells. |
| GSE204948 |
Bulk ATAC-Seq of Trem2+ cells from mouse skin, mouse wound, and mouse basal cell carcinoma (BCC). |
| GSE204949 |
Single-cell RNA-Seq (scRNA-Seq) of mouse basal cell carcinoma (BCC) immune cells. |
|
| Relations |
| BioProject |
PRJNA842755 |
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